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Jan 06, 2026

Managing a Family Medicine Practice in Ontario: A Comprehensive Financial, Tax, and Operational Guide

Family doctors in Ontario manage far more than patient care. Whether you operate as a sole practitioner, independent contractor, or through a Medical Professional Corporation (MPC), your practice involves:

Family doctors in Ontario manage far more than patient care. Whether you operate as a sole practitioner, independent contractor, or through a Medical Professional Corporation (MPC), your practice involves:

  • OHIP and non-OHIP income
  • CRA and provincial tax compliance
  • Payroll and staffing
  • Practice expenses and cash flow
  • Incorporation and compensation planning
  • Retirement and long-term planning
  • Audit and CRA risk management

At Momentum Accounting CPA Professional Corporation, we work with family doctors across Hamilton, Toronto, Mississauga, Brampton, Oakville, Milton, Vaughan, Markham, Scarborough, Ottawa, Kitchener-Waterloo, London, Windsor, and across Ontario to manage every financial aspect of their medical practice.

Understanding OHIP vs Non-OHIP Income

OHIP Income

  • Paid directly by the Ontario Health Insurance Plan
  • Generally HST-exempt
  • Reported as professional medical income
  • Requires accurate reconciliation and reporting

Non-OHIP Income

Includes services such as:

  • Sick notes, forms, and letters
  • Insurance, legal, and employment reports
  • Independent medical examinations (IMEs)
  • Cosmetic or non-insured services
  • Consulting, teaching, or advisory work

Non-OHIP income must be reviewed carefully for:

  • HST applicability
  • Proper invoicing
  • Income classification

Choosing the Right Practice Structure

Sole Proprietor

  • Simple to start
  • Higher personal tax rates
  • Limited planning flexibility
  • Higher risk exposure

Medical Professional Corporation (MPC)

  • Tax deferral opportunities
  • Salary vs dividend planning
  • Better retirement flexibility
  • Enhanced estate and family planning
  • Increased compliance requirements

Many family doctors incorporate once income becomes stable or exceeds personal cash needs.

Salary vs Dividends for Family Doctors

Compensation planning affects:

  • Personal tax
  • CPP contributions
  • RRSP room
  • Mortgage eligibility
  • Retirement planning

Most physicians benefit from a balanced salary-dividend strategy, reviewed annually based on:

  • OHIP income levels
  • Non-OHIP income
  • Family needs
  • Long-term goals

Payroll, Staffing, and Associate Doctors

Family practices often employ:

  • Receptionists
  • Nurses
  • Office managers
  • Associate physicians

Key considerations:

  • Payroll setup and remittances
  • CPP, EI, and employer obligations
  • T4 and T4A reporting
  • WSIB (when applicable)
  • Independent contractor vs employee classification

Misclassification is a common CRA audit trigger.

Practice Expenses & CRA Compliance

Common deductible expenses include:

  • Rent and clinic overhead
  • Medical supplies and equipment
  • EMR and software systems
  • Professional dues and insurance
  • Continuing medical education
  • Vehicle and home office (when applicable)

Expenses must be:

  • Reasonable
  • Properly documented
  • Correctly allocated between personal and professional use

HST Considerations (Brief but Essential)

  • Most medical services are HST-exempt
  • Certain non-medical services may be taxable
  • Only taxable revenue counts toward the $30,000 registration threshold
  • ITCs can only be claimed on taxable activities

Proper separation is critical.

Retirement & Long-Term Planning for Family Doctors

Family doctors often rely on:

  • CPP
  • RRSPs
  • Corporate retained earnings
  • Individual Pension Plans (IPP)
  • Exit and wind-down strategies

Early planning allows:

  • Tax efficiency
  • Income smoothing
  • Reduced retirement risk

Common Mistakes Family Doctors Make

  1. Mixing OHIP and non-OHIP income without tracking
  2. Poor documentation of expenses
  3. Ignoring payroll compliance
  4. Not reviewing compensation annually
  5. Delaying incorporation decisions
  6. Overlooking retirement planning
  7. Assuming accountants unfamiliar with medical practices can “figure it out”

How Momentum Accounting CPA Professional Corporation Supports Family Doctors

We provide end-to-end support for family doctors, including:

  • OHIP and non-OHIP income tracking
  • Medical professional corporation setup
  • Salary vs dividend planning
  • Payroll and staff compliance
  • CRA and OHIP reporting support
  • HST assessment (where applicable)
  • Retirement and long-term planning

📍 Serving Hamilton, Toronto, GTA & Ontario-wide

📧 info@momentumaccountingcpa.ca

📞 647-717-1242

Key Takeaways

  • Family doctor practices involve complex financial decisions
  • OHIP income is only one part of the picture
  • Structure, payroll, tax, and planning matter
  • Proactive CPA support reduces risk and stress
  • A specialized approach delivers better outcomes

Disclaimer

This article is for general informational purposes only and does not constitute tax, legal, or medical advice. Individual circumstances vary. Consult a qualified CPA for personalized guidance.